I am a Research Fellow in the Applied Bioinformatics Group, where I joined in 2025. I completed my PhD at Nankai University, China. My previous research has spanned evolutionary genomics, phylogenetics, biodiversity, and microbiome, using a wide range of sequencing and computational approaches. My current research focuses on applied bioinformatics, particularly crop pangenomics.
| Title | Year | Published by | Link |
|---|---|---|---|
| Phylogenetic and phylodynamic approaches to understanding the evolution of non-small cell lung cancer using single-cell sequencing | 2025 | See DOI. | DOI |
| “Gut microbial communities of velvet worm Euperipatoides rowelli (Onychophora) across deadwood microhabitats in southeastern Australia” | 2025 | See DOI. | DOI |
| Models of microbiome evolution incorporating environmental microbial selection | 2024 | See DOI. | DOI |
| Mugen-UMAP: UMAP visualization and clustering of mutated genes in single-cell DNA sequencing data | 2024 | BMC Bioinformatics | No DOI available |
| Models of microbiome evolution incorporating host resource provisioning | 2024 | See DOI. | DOI |
| pgHMA: Application of the heteroduplex mobility assay analysis in phylogenetics and population genetics | 2022 | Molecular Ecology Resources | DOI |
| An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes | 2021 | PLOS Computational Biology | DOI |
| pgHMA: Application of the Heteroduplex mobility assay analysis in phylogenetics and population genetics | 2021 | Dryad | No DOI available |
| pgHMA: Application of the Heteroduplex Mobility Assay Analysis in Phylogenetics and Population Genetics | 2021 | See DOI. | DOI |
| The draft genome sequence ofEucalyptus polybracteabased on hybrid assembly with short- and long-reads reads | 2021 | See DOI. | DOI |
| Compositional and mutational rate heterogeneity in mitochondrial genomes and its effect on the phylogenetic inferences of Cimicomorpha (Hemiptera: Heteroptera) | 2018 | BMC Genomics | DOI |
| A Mitochondrial Genome of Rhyparochromidae (Hemiptera: Heteroptera) and a Comparative Analysis of Related Mitochondrial Genomes | 2016 | Scientific Reports | DOI |
| Long-branch attraction and the phylogeny of true water bugs (Hemiptera: Nepomorpha) as estimated from mitochondrial genomes | 2014 | BMC Evolutionary Biology | DOI |
| The Complete Mitochondrial Genome of the Stalk-Eyed Bug Chauliops fallax Scott, and the Monophyly of Malcidae (Hemiptera: Heteroptera) | 2013 | PLoS ONE | DOI |